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dc.contributor.advisorVijaya,S
dc.contributor.authorKumar, Priti
dc.date.accessioned2026-03-24T10:39:46Z
dc.date.available2026-03-24T10:39:46Z
dc.date.submitted2001
dc.identifier.urihttps://etd.iisc.ac.in/handle/2005/9728
dc.description.abstractImmune Correlates of Protection and Diagnostic Antigen Development in Japanese Encephalitis Virus (JEV) Abstract and Synopsis Introduction The flavivirus Japanese encephalitis virus (JEV) is the leading cause of viral encephalitis in Asia, with ~35,000 cases and 10,000 deaths annually. Over half of survivors suffer lifelong neurological deficits such as paralysis, convulsions, memory loss, and speech/motor disturbances. Children under 10 years are the most affected. With no effective drug available, vaccination remains the only preventive strategy. Current vaccines, derived from infected mouse brains, are costly, risky to manufacture, and can cause allergic reactions, prompting efforts to develop recombinant vaccines. Key Findings Anticoagulant Studies EDTA inhibited antigen-specific lymphoproliferative responses due to damage to antigen-presenting cells. Heparin and EGTA preserved immune function, enabling reliable assays. NS3-Specific T Cell Responses NS3 protein was immunodominant in convalescent patients and healthy contacts. Healthy individuals produced high levels of IFN- via both CD4 and CD8 T cells, correlating with protective immunity. Patients showed deficient IFN- responses, correlating with severity of neurological sequelae. NS3-specific CD8 T cells also produced perforin, indicating cytotoxic potential. Immunodominant Epitope Mapping Amino acids 193-324 of NS3 contained both class I and II epitopes. This 14.4 kDa stretch elicited IFN- responses comparable to full-length NS3, making it an ideal vaccine candidate. E Glycoprotein Analysis E protein was not a dominant protective antigen. IFN- responses to E were weak compared to NS3, highlighting NS3 as the stronger correlate of protection. Diagnostic Antigen Development Recombinant E glycoprotein ( E) was expressed in a baculovirus system without its membrane anchor. Secreted E protein retained authentic antigenic properties, reacting with conformation-specific monoclonal antibodies. Human sera confirmed E’s diagnostic potential, offering a safer alternative to mouse brain-derived antigens in MAC-ELISA. Conclusions Protective immunity against JEV is strongly associated with NS3-specific Th1 responses and IFN- production. The NS3 193-324 region is a promising candidate for T-cell-based vaccines. The E glycoprotein is less relevant for protective immunity but remains useful for diagnostics. Recombinant E protein expressed in baculovirus can replace conventional antigens in diagnostic assays, reducing cost and risk. This thesis contributes significantly to both experimental vaccine development and diagnostic improvements for JEV, addressing urgent needs in endemic regions.
dc.language.isoen_US
dc.relation.ispartofseriesT05038
dc.rightsI grant Indian Institute of Science the right to archive and to make available my thesis or dissertation in whole or in part in all forms of media, now hereafter known. I retain all proprietary rights, such as patent rights. I also retain the right to use in future works (such as articles or books) all or part of this thesis or dissertation
dc.subjectNS3 Protein
dc.subjectT-cell Epitope Mapping
dc.subjectRecombinant Diagnostic Antigen
dc.titleHuman immune responses to the non-structural protein 3(NS3)and the envelope glycoprotein of Japanese encephalitis virus : interferon gamma and perforin production by NS3-specfic T cells correlate with protective immunity
dc.typeThesis
dc.degree.namePhD
dc.degree.levelDoctoral
dc.degree.grantorIndian Institute of Science
dc.degree.disciplineScience


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