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dc.contributor.advisorD'Silva, Patrick
dc.contributor.authorKumar, Abhishek
dc.date.accessioned2021-04-05T05:09:37Z
dc.date.available2021-04-05T05:09:37Z
dc.date.submitted2020
dc.identifier.urihttps://etd.iisc.ac.in/handle/2005/5036
dc.description.abstractMitochondria are essential eukaryotic organelles required for diverse cellular functions including, energy homeostasis, iron-sulfur cluster biogenesis, and signaling. Therefore, the maintenance of organelle quality control is critical for cell survival, and any impairment in mitochondrial function is detrimental to cells. Proper mitochondrial functioning requires accurate and efficient transport of approximately 99% of proteins from the cytosol to their precise location into the mitochondria. This protein import is performed by sophisticated protein machinery present at the outer and inner mitochondrial membranes. The outer membrane contains the TOM complex, which serves as a general entry gate for most of the mitochondrial proteins. The inner membrane harbors two distinct import machinery types, namely, the presequence translocase (TIM23 complex) and the carrier translocase (TIM22 complex). The TIM23 complex is dedicated machinery for importing proteins containing N-terminal cleavable targeting signals into the matrix and inner membrane. On the other hand, the TIM22 complex facilitates the import of polytopic inner membrane proteins having internal hydrophobic targeting sequences. Tim22 forms the central channel of the carrier translocase with a twin pore structure. However, the role of the central channel forming Tim22 protein in modulating the assembly process of carrier translocase machinery coupled to protein import remains still elusive. In the present study, we report a novel set of conditional mutants isolated by an unbiased genetic screen from different regions of Tim22. Our genetic and biochemical analyses revealed a distinct functional role for different segments of Tim22 in the assembly of carrier translocase machinery. Further, we demonstrated that impairment in the TIM22 complex assembly process influences its translocase activity, the mitochondrial network, and the viability of cells lacking mitochondrial DNA. Overall, our results provide compelling evidence highlighting the functional significance of conserved regions of Tim22 in maintaining the TIM22 complex and mitochondrial integrity. As the substrates of the TIM22 pathway are highly hydrophobic, these proteins' turnover requires efficiently monitored to maintain proteostasis within the organelle. Mitochondria contain several proteases that provide protein quality control in different subcompartments. Yeast mitochondrial escape 1 (Yme1) is an inner membrane AAA class of metalloprotease, which regulates protein quality control with the aid of chaperone-like and proteolytic activities. The current study highlights a novel functional cross-talk between the TIM22 pathway and Yme1. Furthermore, our genetic and biochemical analyses provide compelling evidence for the role of the TIM22 complex and Yme1 in regulating inner membrane protein quality control and mitochondrial health.en_US
dc.language.isoen_USen_US
dc.rightsI grant Indian Institute of Science the right to archive and to make available my thesis or dissertation in whole or in part in all forms of media, now hereafter known. I retain all proprietary rights, such as patent rights. I also retain the right to use in future works (such as articles or books) all or part of this thesis or dissertationen_US
dc.subjectMitochondrial biogenesis and quality controlen_US
dc.subjectTim22en_US
dc.subjectYeast mitochondrial escapeen_US
dc.subject.classificationBiochemistryen_US
dc.titleUnderstanding the structural organization of the carrier translocase machinery in regulating mitochondrial biogenesis and organelle quality controlen_US
dc.typeThesisen_US
dc.degree.namePhDen_US
dc.degree.levelDoctoralen_US
dc.degree.grantorIndian Institute of Scienceen_US
dc.degree.disciplineFaculty of Scienceen_US


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